UPSC MainsZOOLOGY-PAPER-II201315 Marks
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Q14.

What are RNA genes ? State the role of ribozymes and microRNA in protein synthesis.

How to Approach

This question requires a detailed understanding of RNA genes, ribozymes, and microRNA, and their roles in protein synthesis. The answer should begin by defining RNA genes and differentiating them from DNA genes. Then, it should explain the catalytic activity of ribozymes and their involvement in various steps of protein synthesis. Finally, the role of microRNA in regulating gene expression and ultimately protein synthesis should be elaborated. A structured approach, covering definition, function, and examples, will be beneficial.

Model Answer

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Introduction

RNA, or ribonucleic acid, is a crucial molecule essential for coding, decoding, regulation, and expression of genes. While DNA serves as the long-term storage of genetic information, RNA plays a dynamic role in translating that information into functional proteins. RNA genes are segments of DNA that are transcribed into various types of RNA molecules. These RNA molecules, including messenger RNA (mRNA), transfer RNA (tRNA), ribosomal RNA (rRNA), and non-coding RNAs like microRNA, are central to the process of protein synthesis. Understanding the roles of ribozymes and microRNA within this process is vital to comprehending the intricacies of gene expression.

RNA Genes: The Blueprint for Protein Synthesis

RNA genes are DNA sequences that are transcribed into RNA molecules. Unlike DNA, RNA is typically single-stranded and contains ribose sugar instead of deoxyribose, and uracil instead of thymine. Different types of RNA genes code for different types of RNA molecules, each with a specific function in protein synthesis:

  • mRNA (messenger RNA): Carries the genetic code from DNA in the nucleus to ribosomes in the cytoplasm.
  • tRNA (transfer RNA): Transports amino acids to the ribosome for protein assembly.
  • rRNA (ribosomal RNA): Forms the structural and catalytic core of ribosomes.
  • Non-coding RNA (ncRNA): Includes various RNA molecules that do not code for proteins but play regulatory roles, such as microRNA (miRNA).

Ribozymes: Catalytic RNA

Ribozymes are RNA molecules that possess catalytic activity, meaning they can accelerate chemical reactions. Traditionally, enzymes were thought to be exclusively proteins, but the discovery of ribozymes in the 1980s revolutionized our understanding of biological catalysis. Their catalytic activity stems from their complex three-dimensional structure, which allows them to bind substrates and facilitate reactions.

Role of Ribozymes in Protein Synthesis

  • Peptidyl Transferase Activity: The most prominent role of ribozymes in protein synthesis is the peptidyl transferase activity of the ribosome. The 23S rRNA component of the large ribosomal subunit catalyzes the formation of peptide bonds between amino acids during translation. This demonstrates that the ribosome is, in essence, a ribozyme.
  • RNA Splicing: Some ribozymes are involved in self-splicing of RNA, removing introns (non-coding regions) from pre-mRNA molecules.
  • RNA Processing: Ribozymes can participate in the processing of tRNA precursors.

MicroRNA (miRNA): Regulators of Gene Expression

MicroRNAs (miRNAs) are small non-coding RNA molecules (approximately 22 nucleotides long) that play a crucial role in regulating gene expression at the post-transcriptional level. They are transcribed from DNA but do not code for proteins. Instead, they bind to mRNA molecules, leading to either mRNA degradation or translational repression.

Mechanism of miRNA Action in Protein Synthesis

  • mRNA Degradation: When a miRNA binds to an mRNA molecule with perfect or near-perfect complementarity, it triggers the degradation of the mRNA, preventing protein synthesis.
  • Translational Repression: If the miRNA binding is not perfectly complementary, it can inhibit the translation of the mRNA into protein without causing its degradation.
  • Regulation of Development and Disease: miRNAs are involved in a wide range of biological processes, including development, cell differentiation, apoptosis, and immune response. Dysregulation of miRNA expression has been linked to various diseases, including cancer.

Example: Let's consider the regulation of the HOX genes, which are crucial for body plan development. Specific miRNAs can target HOX mRNAs, fine-tuning their expression levels and ensuring proper limb formation. This demonstrates the precise regulatory role of miRNAs in protein synthesis and developmental processes.

Component Role in Protein Synthesis
mRNA Carries genetic code from DNA to ribosome
tRNA Delivers amino acids to ribosome
rRNA Forms ribosome and catalyzes peptide bond formation (ribozyme activity)
miRNA Regulates gene expression by binding to mRNA, leading to degradation or translational repression

Conclusion

In conclusion, RNA genes are fundamental to protein synthesis, giving rise to diverse RNA molecules with specialized functions. Ribozymes, particularly within the ribosome, demonstrate the catalytic potential of RNA, directly participating in peptide bond formation. MicroRNAs, as post-transcriptional regulators, fine-tune gene expression, ensuring precise control over protein levels. Understanding these intricate mechanisms is crucial for comprehending the complexities of cellular processes and developing targeted therapies for various diseases. Further research into RNA biology promises to unlock even more insights into the fundamental principles of life.

Answer Length

This is a comprehensive model answer for learning purposes and may exceed the word limit. In the exam, always adhere to the prescribed word count.

Additional Resources

Key Definitions

Transcription
The process of creating an RNA copy of a DNA sequence, carried out by RNA polymerase.
Translation
The process by which the genetic code carried by mRNA is decoded to produce a specific protein.

Key Statistics

It is estimated that humans have over 2,500 different miRNAs, regulating approximately 60% of all human genes (as of 2018, according to miRBase).

Source: miRBase

Approximately 70% of the human genome is transcribed into RNA, but only about 2% codes for proteins. The remaining 98% is non-coding RNA, including miRNAs, lncRNAs, and others (based on ENCODE project data).

Source: ENCODE Project

Examples

RNA interference (RNAi)

RNA interference is a biological process in which RNA molecules inhibit gene expression, typically by causing the destruction of specific mRNA molecules. This is a powerful tool used in research and has potential therapeutic applications.

Frequently Asked Questions

What is the difference between RNA and DNA?

RNA is typically single-stranded, contains ribose sugar, and uses uracil instead of thymine. DNA is double-stranded, contains deoxyribose sugar, and uses thymine. RNA is also more versatile in its structure and function compared to DNA.

Topics Covered

BiologyMolecular BiologyRNAProtein SynthesisGene Expression