UPSC MainsBOTANY-PAPER-I201510 Marks150 Words
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Q4.

Chemical nature of viroids and their transmission in plants

How to Approach

This question requires a focused answer on viroids, their chemical composition, and modes of transmission in plants. The answer should begin by defining viroids and differentiating them from viruses. It should then detail their unique chemical nature (specifically, their RNA-only composition and lack of a protein coat). Finally, the answer must comprehensively cover the various mechanisms of viroid transmission, including mechanical, vegetative propagation, seed transmission, and vector transmission. A concise and structured approach is crucial to cover all aspects within the word limit.

Model Answer

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Introduction

Viroids are the smallest known infectious pathogens, significantly smaller than viruses, and are exclusively plant pathogens. Discovered in 1971 by Theodor O. Diener, they revolutionized our understanding of infectious agents by demonstrating that pathogenicity could be conferred by nucleic acid alone. Unlike viruses, viroids lack a protein coat and consist solely of a small, circular, single-stranded RNA molecule. Their ability to cause significant economic losses in various crops necessitates a thorough understanding of their chemical nature and transmission mechanisms.

Chemical Nature of Viroids

Viroids are unique in their composition. They are composed entirely of a small (246-401 nucleotides), circular, single-stranded RNA molecule. This RNA is highly structured due to extensive intramolecular base pairing, forming a rod-like or quasi-rod-like secondary structure. This structure is crucial for their stability and infectivity. Crucially, viroids do *not* encode any proteins. Their pathogenicity relies on hijacking the host plant’s cellular machinery for replication and symptom development.

The RNA of viroids lacks a protein capsid, distinguishing them from viruses. The RNA is resistant to RNase digestion due to its highly structured secondary conformation. Different families of viroids exist, categorized based on sequence similarity: Pospiviroidae and Avsunviroidae are the two main families. The Pospiviroidae family contains viroids with a high degree of sequence conservation, while the Avsunviroidae family exhibits greater sequence diversity.

Transmission of Viroids in Plants

Viroid transmission occurs through various mechanisms, contributing to their widespread distribution. These can be broadly categorized as follows:

1. Mechanical Transmission

This involves the direct transfer of viroid RNA through contaminated tools, pruning shears, or even human handling. The viroid RNA is remarkably stable and can persist on surfaces for extended periods, facilitating transmission. This is particularly common in agricultural settings where tools are shared between plants.

2. Vegetative Propagation

Viroids are readily transmitted through vegetative propagation methods like grafting, budding, cuttings, and tubers. Since the viroid resides within the plant tissues, any propagation method utilizing these tissues will inevitably carry the pathogen. This is a significant route of transmission for crops like potatoes (Potato Spindle Tuber Viroid - PSTVd).

3. Seed Transmission

While not as common as vegetative transmission, some viroids can be transmitted through seeds. The efficiency of seed transmission varies depending on the viroid species and the plant host. The viroid RNA can infect the developing embryo, leading to infected seedlings.

4. Vector Transmission

Certain insects, nematodes, and fungi can act as vectors for viroid transmission. For example, aphids have been implicated in the transmission of some viroids. The viroid adheres to the vector’s body and is transferred to healthy plants during feeding. However, unlike viruses, viroids do not replicate within the vector.

5. Pollen Transmission

Recent research suggests that pollen can also serve as a transmission route for viroids. Viroid RNA can be present in pollen grains and transferred to the stigma during pollination, leading to infection of the developing seed and fruit.

Transmission Method Efficiency Examples
Mechanical High Citrus Exocortis Viroid (CEVd) spread via pruning shears
Vegetative Propagation Very High Potato Spindle Tuber Viroid (PSTVd) in potatoes
Seed Transmission Low to Moderate Coconut Cadang-Cadang Viroid (CCCVd)
Vector Transmission Moderate Some viroids transmitted by aphids

Conclusion

Viroids, despite their simple chemical composition – solely RNA – represent a significant threat to agricultural productivity. Their diverse transmission mechanisms, ranging from mechanical means to vector-mediated spread, contribute to their persistence and dissemination. Understanding these pathways is crucial for developing effective disease management strategies, including sanitation practices, use of certified disease-free planting material, and vector control measures. Further research into viroid-host interactions is essential for developing resistant crop varieties and mitigating the economic impact of these unique pathogens.

Answer Length

This is a comprehensive model answer for learning purposes and may exceed the word limit. In the exam, always adhere to the prescribed word count.

Additional Resources

Key Definitions

Viroid
The smallest known infectious pathogen, consisting solely of a small, circular, single-stranded RNA molecule, lacking a protein coat.
RNA silencing
A gene regulatory mechanism in plants (and other eukaryotes) where small RNA molecules (like those derived from viroids) trigger the degradation of complementary mRNA molecules, effectively silencing gene expression.

Key Statistics

Potato Spindle Tuber Viroid (PSTVd) can cause yield losses of up to 60% in potato crops.

Source: EPPO (European and Mediterranean Plant Protection Organization) - Knowledge Cutoff 2023

Approximately 10 different viroid species are known to infect over 300 different plant species globally.

Source: Diener, T. O. (1991). Viroids. Annual Review of Phytopathology, 29(1), 331–357. - Knowledge Cutoff 2023

Examples

Coconut Cadang-Cadang Viroid (CCCVd)

CCCVd is a devastating viroid disease affecting coconut palms in the Philippines and other Southeast Asian countries, leading to significant economic losses in the coconut industry.

Frequently Asked Questions

How do viroids cause disease symptoms without encoding any proteins?

Viroids induce disease symptoms by interfering with the host plant’s RNA processing pathways, leading to gene silencing and disruption of normal cellular functions. They trigger RNA silencing mechanisms, leading to the degradation of host mRNAs.

Topics Covered

BotanyPlant PathologyPlant VirologyDisease TransmissionMolecular Biology