UPSC MainsZOOLOGY-PAPER-II201720 Marks
Q6.

What is protein targetting? Illustrate the same with reference to transport of proteins to plasma membrane.

How to Approach

This question requires a detailed understanding of protein trafficking, specifically focusing on the mechanisms involved in delivering proteins to the plasma membrane. The answer should begin with a definition of protein targeting and then systematically explain the different pathways involved in plasma membrane protein transport. Key concepts like signal sequences, vesicle trafficking, and the role of different organelles (ER, Golgi) should be covered. A clear, step-by-step explanation with illustrative examples will be crucial for a high score. The answer should demonstrate a strong grasp of cell biology principles.

Model Answer

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Introduction

Protein targeting is the cellular process of directing proteins to their appropriate locations within the cell, be it organelles like the mitochondria, endoplasmic reticulum, or the plasma membrane, or even outside the cell. This precise localization is crucial for proper cellular function. Errors in protein targeting can lead to various diseases. The transport of proteins to the plasma membrane is a particularly important aspect of this process, as it governs cell communication, nutrient uptake, and waste removal. This process relies on a complex interplay of signal sequences, transport vesicles, and the secretory pathway.

Understanding Protein Targeting

Protein targeting begins with the synthesis of a polypeptide chain on ribosomes. Many proteins destined for the secretory pathway (including those for the plasma membrane) contain a signal sequence, a short stretch of amino acids that acts as a “zip code” directing the ribosome and nascent polypeptide to the endoplasmic reticulum (ER).

The Secretory Pathway and Plasma Membrane Targeting

The journey of proteins to the plasma membrane involves several key steps within the secretory pathway:

1. Translocation into the ER

Proteins with an ER signal sequence are translocated into the ER lumen via a protein complex called the translocon. Signal peptidase, an enzyme within the ER lumen, cleaves the signal sequence. Proteins can be either fully translocated (soluble proteins) or remain partially embedded in the ER membrane (integral membrane proteins).

2. Folding and Modification in the ER

Within the ER, proteins undergo folding, assisted by chaperone proteins like BiP. They also undergo post-translational modifications such as glycosylation, which adds sugar molecules to the protein. Quality control mechanisms ensure that only properly folded proteins proceed further.

3. Transport from ER to Golgi Apparatus

Proteins exit the ER in transport vesicles that bud off from the ER membrane. These vesicles move towards the Golgi apparatus and fuse with its cis-Golgi network. This transport is mediated by coat proteins like COPII.

4. Further Processing in the Golgi Apparatus

As proteins move through the Golgi apparatus (cis, medial, and trans compartments), they undergo further modifications, including glycosylation refinement and sorting. The Golgi acts as a central processing and packaging center.

5. Vesicle Budding from the Trans-Golgi Network (TGN)

Proteins destined for the plasma membrane are packaged into vesicles that bud off from the TGN. Different coat proteins, such as clathrin, are involved in this process. The specific coat protein determines the destination of the vesicle.

6. Vesicle Targeting and Fusion with the Plasma Membrane

Vesicles containing plasma membrane proteins move towards the cell surface and fuse with the plasma membrane. This fusion is mediated by SNARE proteins (soluble N-ethylmaleimide-sensitive factor attachment protein receptors). v-SNAREs on the vesicle membrane interact with t-SNAREs on the target membrane, bringing the membranes close together and facilitating fusion. This releases the protein into the plasma membrane or the extracellular space.

Specific Targeting Signals and Mechanisms

Beyond the initial ER signal sequence, additional targeting signals can direct proteins to specific domains within the plasma membrane. For example:

  • GPI Anchor: Some proteins are attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor, a lipid modification added in the ER.
  • Lipid Rafts: Certain proteins preferentially localize to lipid rafts, specialized microdomains within the plasma membrane enriched in cholesterol and sphingolipids.

Table Summarizing the Pathway

Organelle/Step Key Events Proteins Involved
ER Translocation, folding, glycosylation, signal sequence removal Translocon, Signal peptidase, Chaperone proteins (BiP)
ER to Golgi Vesicle budding and transport COPII coat proteins
Golgi Further modification and sorting Glycosyltransferases
TGN Vesicle budding Clathrin coat proteins
Plasma Membrane Vesicle targeting and fusion SNARE proteins

Conclusion

Protein targeting to the plasma membrane is a highly regulated and complex process essential for cellular function. It involves a coordinated series of events, from initial signal sequence recognition to vesicle trafficking and fusion. Disruptions in this pathway can lead to a variety of diseases, highlighting its importance in maintaining cellular homeostasis. Further research continues to unravel the intricacies of protein targeting, offering potential therapeutic targets for various disorders.

Answer Length

This is a comprehensive model answer for learning purposes and may exceed the word limit. In the exam, always adhere to the prescribed word count.

Additional Resources

Key Definitions

SNARE proteins
Soluble N-ethylmaleimide-sensitive factor attachment protein receptors. These proteins mediate vesicle fusion with target membranes by forming stable complexes.
Translocon
A protein complex embedded in the ER membrane that forms a channel through which polypeptide chains are translocated into the ER lumen.

Key Statistics

Approximately 30% of proteins synthesized in eukaryotic cells are destined for secretion or localization to membranes.

Source: Alberts et al., Molecular Biology of the Cell, 6th edition (2015)

It is estimated that approximately 20-30% of newly synthesized proteins are targeted to the secretory pathway.

Source: Lodish et al., Molecular Cell Biology, 7th edition (2008)

Examples

Insulin Receptor Trafficking

The insulin receptor is synthesized in the ER, glycosylated in the Golgi, and transported to the plasma membrane in vesicles. Upon insulin binding, the receptor undergoes endocytosis and subsequent signaling cascades.

Frequently Asked Questions

What happens to misfolded proteins in the ER?

Misfolded proteins are retained in the ER and targeted for degradation via ER-associated degradation (ERAD). This process involves retrotranslocation of the protein back into the cytosol, where it is ubiquitinated and degraded by the proteasome.

Topics Covered

BiologyCell BiologyProtein TraffickingMembrane TransportCellular Processes