UPSC MainsBOTANY-PAPER-II201820 Marks
Q9.

Discuss the role of cyclin-dependent protein kinases in controlling the cell cycle. Explain with the help of a diagram.

How to Approach

This question requires a detailed understanding of the cell cycle and the role of cyclin-dependent protein kinases (CDKs) in its regulation. The answer should begin with a clear definition of CDKs and their function. It should then explain the different phases of the cell cycle and how CDKs, in conjunction with cyclins, control the transitions between these phases. A diagram illustrating the CDK-cyclin complexes and their activity during the cell cycle is crucial. Finally, the answer should discuss the consequences of CDK dysregulation. A structured approach focusing on CDK structure, cyclin interaction, phase-specific activation, and regulatory mechanisms will be effective.

Model Answer

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Introduction

The cell cycle, a fundamental process in all living organisms, ensures accurate DNA replication and segregation, leading to cell division. This tightly regulated process is orchestrated by a complex network of proteins, with cyclin-dependent protein kinases (CDKs) playing a central role. CDKs are serine/threonine kinases that are inactive on their own and require association with regulatory subunits called cyclins to become catalytically active. Their activity fluctuates throughout the cell cycle, driving the progression through distinct phases – G1, S, G2, and M. Understanding the role of CDKs is crucial for comprehending normal cell growth and development, as well as the mechanisms underlying diseases like cancer.

Cyclin-Dependent Protein Kinases (CDKs): Structure and Function

CDKs are a family of protein kinases that are highly conserved across eukaryotes. They possess a characteristic structure consisting of an ATP-binding pocket and a T-loop, which, when phosphorylated, inhibits kinase activity. Human cells express several CDKs, including CDK1, CDK2, CDK3, CDK4, CDK6, CDK7, CDK8, and CDK9. Each CDK is associated with specific cyclins and regulates different phases of the cell cycle.

Cyclins: The Regulatory Subunits

Cyclins are a family of proteins whose levels fluctuate cyclically during the cell cycle. They bind to and activate CDKs, forming CDK-cyclin complexes. Different cyclins are expressed at different stages of the cell cycle, dictating the specificity of the CDK-cyclin complex. For example, cyclin D is expressed during G1 phase, cyclin E during late G1, cyclin A during S and G2 phases, and cyclin B during M phase.

CDK-Cyclin Complexes and Cell Cycle Phases

The activity of CDK-cyclin complexes is tightly regulated, ensuring that the cell cycle progresses in an orderly manner. Here's a breakdown of CDK-cyclin activity during each phase:

  • G1 Phase: CDK4/6-cyclin D complexes promote progression through G1 by phosphorylating the retinoblastoma protein (Rb), releasing the E2F transcription factor, which then activates genes required for S phase entry.
  • S Phase: CDK2-cyclin E and CDK2-cyclin A complexes initiate DNA replication and ensure its completion.
  • G2 Phase: CDK1-cyclin A complexes prepare the cell for mitosis.
  • M Phase: CDK1-cyclin B (also known as MPF - Maturation Promoting Factor) drives the cell into mitosis, initiating chromosome condensation, nuclear envelope breakdown, and spindle formation.

Regulation of CDK Activity

CDK activity is regulated by multiple mechanisms:

  • Cyclin Binding: The primary mode of activation.
  • Phosphorylation/Dephosphorylation: CDKs require phosphorylation at a specific threonine residue (e.g., Thr160 in CDK2) by CDK-activating kinase (CAK) for full activation. Inhibitory phosphorylation can be reversed by phosphatases.
  • CDK Inhibitors (CKIs): Proteins like p21, p27, and p16 bind to CDK-cyclin complexes, inhibiting their activity. These inhibitors play a crucial role in cell cycle arrest in response to DNA damage or other stress signals.
  • Ubiquitin-Proteasome System: Cyclins are degraded by the ubiquitin-proteasome pathway, leading to inactivation of the CDK-cyclin complex and progression to the next phase.

Diagram of CDK-Cyclin Activity During the Cell Cycle

CDK-Cyclin Activity During Cell Cycle

(Note: This is a representative diagram. Actual activity profiles can vary.)

Consequences of CDK Dysregulation

Dysregulation of CDKs is frequently observed in cancer. Mutations in CDKs or cyclins, or alterations in the expression of CKIs, can lead to uncontrolled cell proliferation. For example, overexpression of cyclin D is common in breast cancer, while inactivation of p16 is frequently observed in melanoma. Therefore, CDKs are attractive targets for cancer therapy, and several CDK inhibitors are currently in clinical development.

Conclusion

In conclusion, cyclin-dependent protein kinases are pivotal regulators of the cell cycle, orchestrating the precise timing of events necessary for accurate cell division. Their activity is tightly controlled by cyclins, phosphorylation, inhibitors, and the ubiquitin-proteasome system. Understanding the intricate mechanisms governing CDK function is essential not only for comprehending fundamental biological processes but also for developing effective strategies to combat diseases like cancer, where CDK dysregulation is a hallmark. Further research into CDK regulation promises to yield novel therapeutic interventions.

Answer Length

This is a comprehensive model answer for learning purposes and may exceed the word limit. In the exam, always adhere to the prescribed word count.

Additional Resources

Key Definitions

Cell Cycle
The series of events that take place in a cell leading to its division and duplication of its DNA to produce two daughter cells.
Checkpoint
A control mechanism in the cell cycle that ensures the completion of one phase before the start of the next, preventing errors in DNA replication or chromosome segregation.

Key Statistics

Approximately 85-90% of human cancers are characterized by genomic instability, often linked to defects in cell cycle control mechanisms (Hanahan & Weinberg, 2011).

Source: Hanahan, D., & Weinberg, R. A. (2011). Hallmarks of cancer: the next generation. Cell, 144(5), 646–674.

Approximately 20% of all cancers are linked to defects in cell cycle checkpoints (Lukas et al., 2011).

Source: Lukas, J., Bartek, J., & Strauss, M. (2011). Checkpoints, cell cycle arrest and cancer. Nature Reviews Cancer, 11(6), 419–430.

Examples

Retinoblastoma (Rb) and Cell Cycle Control

Rb is a tumor suppressor protein that inhibits cell cycle progression by binding to E2F transcription factors. When Rb is phosphorylated by CDK4/6-cyclin D complexes, it releases E2F, allowing it to activate genes required for S phase entry. Mutations in the Rb gene are frequently found in retinoblastoma, a childhood eye cancer.

Frequently Asked Questions

What is the difference between a cyclin and a CDK?

CDKs are enzymes (protein kinases) that are catalytically inactive on their own. Cyclins are regulatory proteins that bind to CDKs, activating them and determining their substrate specificity. CDKs provide the enzymatic activity, while cyclins provide the timing and specificity.

Topics Covered

BiologyCell BiologyCell CycleCell DivisionMolecular Biology